C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily C, member 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170464 DNAJC18 9606 - 5:139408588-139444491 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302060 DNAJC18-001 139410203-139439526 protein_coding
  ENST00000505268 DNAJC18-009 139440679-139444451 processed_transcript
  ENST00000505568 DNAJC18-005 139422785-139439501 nonsense_mediated_decay
  ENST00000506870 DNAJC18-006 139425005-139439459 nonsense_mediated_decay
  ENST00000507405 DNAJC18-012 139420202-139437560 processed_transcript
  ENST00000508445 DNAJC18-007 139414187-139426229 protein_coding
  ENST00000510770 DNAJC18-008 139414055-139420310 retained_intron
  ENST00000512473 DNAJC18-004 139437523-139444479 protein_coding
  ENST00000514052 DNAJC18-010 139419068-139425048 protein_coding
  ENST00000515277 DNAJC18-002 139426212-139444491 protein_coding
  ENST00000515559 DNAJC18-011 139408588-139414239 nonsense_mediated_decay
  ENST00000515581 DNAJC18-003 139426187-139444482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302060ENST00000508445ENST00000510770ENST00000515277
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302060 0.923±0.00 3.821±0.00 8.141±3.57 0.967±0.31 1.976±0.00 1.328±0.75 1.529±0.00 0.685±0.57 1.999±0.00 0.928±0.00 2.411±1.72 1.390±0.12 3.201±0.00
ENST00000508445 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.805±0.00 N/A N/A 26.199±0.00
ENST00000510770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.539±0.00 N/A 58.331±0.00
ENST00000515277 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.234±0.00 N/A N/A 27.545±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000546 CIL_000546_0001 CGP 5:139396563-139444491

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056005 dnajc18 DnaJ (Hsp40) homolog, subfamily C, member 18 protein_coding Danio_rerio
ENSMUSG00000024350 Dnajc18 DnaJ (Hsp40) homolog, subfamily C, member 18 protein_coding Mus_musculus

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