C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COMM domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170619 COMMD5 9606 - 8:144841042-144853736 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305103 COMMD5-004 144850219-144853034 protein_coding
  ENST00000402718 COMMD5-003 144850166-144853067 protein_coding
  ENST00000450361 COMMD5-002 144850188-144853736 protein_coding
  ENST00000529143 COMMD5-006 144850825-144852657 protein_coding
  ENST00000530332 COMMD5-007 144841042-144851174 nonsense_mediated_decay
  ENST00000533270 COMMD5-005 144850826-144853003 protein_coding
  ENST00000543949 COMMD5-201 144850167-144853067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305103ENST00000402718ENST00000450361ENST00000530332
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305103 3.160±0.00 6.148±0.00 1.589±0.00 N/A 1.442±0.00 0.500±0.00 6.021±0.00 2.510±0.00 N/A N/A 8.492±1.24 6.762±1.40 N/A
ENST00000402718 N/A N/A 2.518±0.00 3.558±0.00 2.736±0.00 3.204±0.00 4.258±0.00 5.063±0.00 1.915±0.00 N/A 1.969±0.00 5.287±0.00 N/A
ENST00000450361 N/A N/A N/A N/A 1.361±0.00 N/A N/A N/A N/A N/A N/A 4.699±0.00 N/A
ENST00000530332 4.242±0.00 8.087±0.00 4.891±0.00 4.662±0.00 2.497±0.00 3.424±0.00 3.949±0.00 1.665±0.22 N/A 2.995±2.20 7.088±4.59 6.627±0.00 12.560±3.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VU CIL_0000VU_0001 CGP 8:144827464-144853736

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029660 commd5 COMM domain containing 5 protein_coding Danio_rerio
ENSMUSG00000055041 Commd5 COMM domain containing 5 protein_coding Mus_musculus

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