C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gametocyte specific factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170627 GTSF1 9606 - 12:54455950-54473602 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305879 GTSF1-001 54455957-54473599 protein_coding
  ENST00000546575 GTSF1-005 54456139-54463333 retained_intron
  ENST00000546739 GTSF1-003 54464703-54473602 retained_intron
  ENST00000546931 GTSF1-006 54455950-54473549 nonsense_mediated_decay
  ENST00000548538 GTSF1-008 54464697-54468947 processed_transcript
  ENST00000549083 GTSF1-009 54468925-54472644 processed_transcript
  ENST00000552336 GTSF1-007 54455961-54459602 processed_transcript
  ENST00000552395 GTSF1-004 54455960-54473570 processed_transcript
  ENST00000552397 GTSF1-002 54455954-54472627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000305879ENST00000546575ENST00000546931ENST00000548538ENST00000552395ENST00000552397
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000305879 N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A 0.247±0.11 9.262±2.93 92.728±1.93
ENST00000546575 N/A 0.287±0.00 N/A N/A 0.191±0.00 N/A N/A N/A 0.133±0.00 0.136±0.01 N/A N/A
ENST00000546931 0.172±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548538 N/A N/A N/A N/A 0.613±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000552395 N/A 1.137±0.00 N/A N/A N/A 0.250±0.20 N/A 0.111±0.00 N/A N/A 7.644±0.00 77.996±0.00
ENST00000552397 0.013±0.00 0.109±0.00 0.066±0.00 0.040±0.03 N/A 0.042±0.00 0.007±0.00 0.028±0.00 0.022±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003E CIL_00003E_0001 CGP 12:54395261-54473602

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000887 GTSF1L gametocyte specific factor 1 protein_coding Danio_rerio
ENSMUSG00000022487 Gtsf1 gametocyte specific factor 1 protein_coding Mus_musculus

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