C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin tyrosine ligase-like family, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170703 TTLL6 9606 - 17:48762235-48817214 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376681 TTLL6-005 48762243-48817077 nonsense_mediated_decay
  ENST00000393382 TTLL6-003 48762241-48817214 protein_coding
  ENST00000416950 TTLL6-002 48762241-48794334 nonsense_mediated_decay
  ENST00000424018 TTLL6-008 48786249-48794294 nonsense_mediated_decay
  ENST00000433608 TTLL6-001 48762235-48794334 protein_coding
  ENST00000456415 TTLL6-006 48801559-48817141 nonsense_mediated_decay
  ENST00000470462 TTLL6-007 48806174-48817111 processed_transcript
  ENST00000490027 TTLL6-004 48762241-48817053 retained_intron
  ENST00000509809 TTLL6-010 48797130-48803986 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000376681ENST00000393382ENST00000416950ENST00000424018ENST00000433608ENST00000470462ENST00000490027ENST00000509809
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000376681 N/A N/A 0.310±0.00 0.101±0.00 0.041±0.00 0.082±0.00 0.007±0.00 N/A N/A 0.127±0.00 N/A N/A
ENST00000393382 N/A N/A 0.147±0.00 0.055±0.00 N/A 0.372±0.00 N/A N/A N/A 0.345±0.19 N/A 6.437±2.93
ENST00000416950 0.091±0.00 0.150±0.00 N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A 0.035±0.02 N/A
ENST00000424018 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.823±0.00 N/A 19.661±0.00
ENST00000433608 N/A 0.027±0.00 N/A N/A 0.035±0.00 N/A N/A N/A 0.089±0.00 0.107±0.00 0.051±0.00 N/A
ENST00000470462 0.143±0.00 0.412±0.00 N/A N/A 0.425±0.00 0.176±0.00 0.106±0.00 N/A N/A N/A N/A N/A
ENST00000490027 N/A N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A 0.197±0.05 N/A N/A
ENST00000509809 N/A 0.162±0.00 N/A 0.429±0.00 N/A N/A 0.202±0.00 N/A 0.783±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001578 IEA microtubule bundle formation
GO:0003353 IEA positive regulation of cilium movement
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006464 IEA cellular protein modification process
GO:0015631 ISS tubulin binding
GO:0016874 IEA ligase activity
GO:0018095 ISS protein polyglutamylation
GO:0036064 IDA ciliary basal body
GO:0051013 IEA microtubule severing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054023 ttll6 tubulin tyrosine ligase-like family, member 6 protein_coding Danio_rerio
ENSMUSG00000038756 Ttll6 tubulin tyrosine ligase-like family, member 6 protein_coding Mus_musculus

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