C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY (sex determining region Y)-box 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171056 SOX7 9606 - 8:10723768-10730512 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304501 SOX7-001 10723768-10730512 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304501
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304501 6.365±0.00 7.244±0.00 0.578±0.00 0.344±0.16 6.740±0.00 3.305±0.00 1.925±1.39 1.164±0.66 0.908±0.00 16.614±12.16 2.345±0.00 1.466±0.37 17.763±7.89 3.100±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001706 IDA endoderm formation
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003705 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0008285 IDA negative regulation of cell proliferation
GO:0043280 IDA positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043565 IEA sequence-specific DNA binding
GO:0044212 ISS transcription regulatory region DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0060828 IDA regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030125 sox7 SRY-box containing gene 7 protein_coding Danio_rerio
ENSMUSG00000063060 Sox7 SRY (sex determining region Y)-box 7 protein_coding Mus_musculus

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