C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C1GALT1-specific chaperone 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171155 C1GALT1C1 9606 - X:120625793-120630150 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304661 C1GALT1C1-001 120625793-120630150 protein_coding
  ENST00000371313 C1GALT1C1-002 120625931-120629995 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304661ENST00000371313
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304661 7.710±0.00 6.962±0.00 3.058±0.00 4.825±0.54 7.216±1.70 7.665±1.09 4.264±2.25 9.586±3.53 4.913±1.41 4.809±0.47 0.543±0.49 8.906±2.07 8.267±0.93 5.934±2.16
ENST00000371313 N/A 2.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.946±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GE CIL_0000GE_0002 CGP X:120594010-120630150

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 TAS polypeptide N-acetylgalactosaminyltransferase activity
GO:0005515 IPI protein binding
GO:0006493 IMP protein O-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0030168 IEA platelet activation
GO:0036344 IEA platelet morphogenesis
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0051347 IEA positive regulation of transferase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036335 c1galt1c1 C1GALT1-specific chaperone 1 protein_coding Danio_rerio
ENSMUSG00000048970 C1galt1c1 C1GALT1-specific chaperone 1 protein_coding Mus_musculus

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