C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SHC SH2-domain binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171241 SHCBP1 9606 - 16:46580554-46621626 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303383 SHCBP1-001 46580554-46621626 protein_coding
  ENST00000563219 SHCBP1-006 46595624-46603844 retained_intron
  ENST00000564272 SHCBP1-003 46620466-46621351 processed_transcript
  ENST00000565887 SHCBP1-004 46603990-46615983 retained_intron
  ENST00000566016 SHCBP1-002 46603594-46621368 retained_intron
  ENST00000567698 SHCBP1-007 46581913-46584253 retained_intron
  ENST00000569702 SHCBP1-005 46599929-46615993 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303383ENST00000566016ENST00000567698ENST00000569702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303383 0.137±0.00 0.225±0.00 0.117±0.00 0.109±0.06 0.302±0.17 0.026±0.00 0.085±0.06 1.351±0.00 0.051±0.02 0.128±0.00 0.073±0.00 1.066±0.71 1.453±1.10 4.002±1.12
ENST00000566016 N/A N/A 0.191±0.00 N/A N/A 1.063±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567698 N/A N/A 0.683±0.00 N/A N/A N/A 0.492±0.00 0.752±0.00 N/A N/A N/A N/A N/A N/A
ENST00000569702 N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A N/A 1.030±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008543 ISS fibroblast growth factor receptor signaling pathway
GO:0042169 IEA SH2 domain binding
GO:2000177 ISS regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052167 shcbp1 SHC SH2-domain binding protein 1 protein_coding Danio_rerio
ENSMUSG00000022322 Shcbp1 Shc SH2-domain binding protein 1 protein_coding Mus_musculus

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