C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171346 KRT15 9606 - 17:41513743-41522529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254043 KRT15-001 41513743-41522413 protein_coding
  ENST00000393974 KRT15-004 41513745-41521019 protein_coding
  ENST00000393976 KRT15-007 41513746-41521719 protein_coding
  ENST00000458290 KRT15-006 41515562-41522529 protein_coding
  ENST00000463447 KRT15-005 41515885-41521783 retained_intron
  ENST00000470004 KRT15-003 41516808-41521819 nonsense_mediated_decay
  ENST00000474031 KRT15-008 41513746-41521774 retained_intron
  ENST00000497016 KRT15-002 41516104-41521901 nonsense_mediated_decay
  ENST00000586794 KRT15-009 41513757-41514754 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254043ENST00000393974ENST00000393976ENST00000458290ENST00000463447ENST00000474031ENST00000497016ENST00000586794
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254043 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A
ENST00000393974 N/A N/A 0.016±0.00 0.026±0.00 N/A N/A 0.025±0.00 N/A N/A N/A 0.183±0.00 N/A N/A N/A
ENST00000393976 0.138±0.00 0.027±0.00 N/A 0.095±0.08 40.376±37.53 0.168±0.00 0.009±0.00 0.237±0.02 N/A 3.531±0.00 N/A 25.449±31.55 0.129±0.01 0.363±0.00
ENST00000458290 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.379±2.64 N/A 24.476±27.73 0.521±0.00 N/A
ENST00000463447 N/A N/A N/A N/A 3.067±0.00 N/A N/A N/A N/A N/A N/A N/A 0.194±0.07 3.096±2.29
ENST00000474031 0.192±0.00 0.166±0.00 N/A 0.060±0.00 N/A 0.026±0.01 0.021±0.00 0.293±0.00 0.020±0.00 N/A 0.006±0.00 0.797±0.66 0.104±0.04 N/A
ENST00000497016 N/A N/A 0.048±0.00 N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A 0.902±0.00
ENST00000586794 N/A N/A 0.156±0.00 N/A N/A N/A N/A N/A N/A 5.068±0.00 N/A N/A 0.435±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000I CGP 17:41500981-41522529
CIL_00056U CIL_00056U_000G CGP 17:41513743-41528308

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005882 IEA intermediate filament
GO:0008544 TAS epidermis development
GO:0070062 IDA extracellular vesicular exosome
GO:0097110 IPI scaffold protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000212 zgc:92061 zgc:92061 protein_coding Danio_rerio
ENSDARG00000014356 zgc:92035 zgc:92035 protein_coding Danio_rerio
ENSDARG00000022334 BX469912.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000023082 krt1-19d keratin, type 1, gene 19d protein_coding Danio_rerio
ENSDARG00000036832 cyt1l type I cytokeratin, enveloping layer, like protein_coding Danio_rerio
ENSDARG00000036834 zgc:109868 zgc:109868 protein_coding Danio_rerio
ENSDARG00000036840 krt15 keratin 15 protein_coding Danio_rerio
ENSDARG00000044975 zgc:153629 zgc:153629 protein_coding Danio_rerio
ENSDARG00000044976 zgc:136902 zgc:136902 protein_coding Danio_rerio
ENSDARG00000090268 si:dkeyp-113d7.4 si:dkeyp-113d7.4 protein_coding Danio_rerio
ENSDARG00000092947 cyt1 type I cytokeratin, enveloping layer protein_coding Danio_rerio
ENSDARG00000094041 krt17 keratin 17 protein_coding Danio_rerio
ENSDARG00000095147 wu:fb17f05 wu:fb17f05 protein_coding Danio_rerio
ENSMUSG00000054146 Krt15 keratin 15 protein_coding Mus_musculus

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