C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: splA/ryanodine receptor domain and SOCS box containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171621 SPSB1 9606 + 1:9292880-9369532 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328089 SPSB1-001 9292880-9369532 protein_coding
  ENST00000357898 SPSB1-003 9351431-9367863 protein_coding
  ENST00000377399 SPSB1-002 9355707-9367575 protein_coding
  ENST00000450402 SPSB1-004 9294528-9356497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328089ENST00000357898ENST00000377399ENST00000450402
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328089 20.001±0.00 7.090±0.00 0.624±0.00 6.039±0.00 7.313±4.98 6.019±4.26 1.982±1.74 11.442±0.00 4.756±3.09 10.306±9.54 15.679±0.00 10.663±6.24 8.629±2.67 6.056±1.37
ENST00000357898 N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A 1.095±0.00 N/A 0.422±0.00 1.174±0.00 N/A N/A
ENST00000377399 N/A N/A 0.831±0.00 N/A N/A N/A N/A N/A 1.675±0.00 N/A 1.114±0.00 13.742±0.00 7.096±2.68 3.560±0.00
ENST00000450402 N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A 4.359±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VW CIL_0008VW_0001 VISTA 1:9071068-9672775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056515 spsb1 splA/ryanodine receptor domain and SOCS box containing 1 protein_coding Danio_rerio
ENSMUSG00000039911 Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 protein_coding Mus_musculus

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