C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calmodulin binding transcription activator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171735 CAMTA1 9606 + 1:6785324-7769706 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303635 CAMTA1-001 6785324-7769706 protein_coding
  ENST00000461311 CAMTA1-005 6785552-6887787 nonsense_mediated_decay
  ENST00000461580 CAMTA1-007 6853052-6888150 processed_transcript
  ENST00000467267 CAMTA1-011 6874056-6887842 processed_transcript
  ENST00000467404 CAMTA1-003 6785518-6872019 protein_coding
  ENST00000470648 CAMTA1-006 6853048-6888193 processed_transcript
  ENST00000472283 CAMTA1-008 6853095-6872045 processed_transcript
  ENST00000473578 CAMTA1-010 6785480-6872038 protein_coding
  ENST00000476163 CAMTA1-002 6785464-6888201 processed_transcript
  ENST00000476864 CAMTA1-015 7744961-7766522 protein_coding
  ENST00000482934 CAMTA1-012 6825110-6888188 nonsense_mediated_decay
  ENST00000486138 CAMTA1-004 6806988-6871858 nonsense_mediated_decay
  ENST00000490738 CAMTA1-009 6785454-6872053 processed_transcript
  ENST00000490905 CAMTA1-013 7744914-7767856 protein_coding
  ENST00000495233 CAMTA1-014 7736408-7767856 protein_coding
  ENST00000557126 CAMTA1-016 6785491-6887865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303635ENST00000461311ENST00000467267ENST00000470648ENST00000473578ENST00000476163ENST00000490738ENST00000490905ENST00000495233
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303635 N/A N/A 0.175±0.00 8.383±0.00 0.412±0.00 0.613±0.54 0.090±0.00 0.695±0.55 0.153±0.00 2.157±0.00 0.156±0.00 0.391±0.05 0.295±0.03 1.395±0.08
ENST00000461311 22.460±0.00 12.704±0.00 N/A N/A 10.534±0.00 38.408±0.00 29.682±0.00 10.094±6.29 13.190±0.00 36.372±0.00 20.962±0.00 25.040±13.88 10.790±0.15 25.594±0.00
ENST00000467267 N/A N/A N/A N/A N/A 1.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470648 N/A N/A 1.535±0.00 N/A N/A 1.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473578 23.172±0.00 16.630±0.00 1.699±0.00 N/A 21.257±0.00 15.486±14.03 19.575±14.19 23.750±0.00 7.203±1.90 19.549±0.00 9.973±7.09 31.340±30.66 10.065±3.85 32.083±0.00
ENST00000476163 N/A 12.401±0.00 N/A N/A 7.626±0.00 10.281±0.00 N/A 11.235±0.00 5.330±0.00 N/A 5.823±0.00 6.662±2.79 5.121±2.38 12.088±0.00
ENST00000490738 11.043±0.00 N/A 2.610±0.00 N/A N/A N/A 1.807±0.00 N/A N/A N/A N/A 5.439±0.00 N/A N/A
ENST00000490905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.915±0.00 0.773±0.00 1.990±0.00
ENST00000495233 N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A N/A 2.426±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019N CIL_00019N_0002 CGP 1:6785324-7781432

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007824 CR847998.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000077428 camta1a calmodulin binding transcription activator 1a protein_coding Danio_rerio
ENSMUSG00000014592 Camta1 calmodulin binding transcription activator 1 protein_coding Mus_musculus

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