C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 5-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171763 SPATA5L1 9606 + 15:45402331-45421419 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305560 SPATA5L1-001 45402331-45421419 protein_coding
  ENST00000525552 SPATA5L1-003 45405459-45410491 nonsense_mediated_decay
  ENST00000531624 SPATA5L1-004 45410373-45421378 protein_coding
  ENST00000531970 SPATA5L1-002 45402375-45421327 nonsense_mediated_decay
  ENST00000533199 SPATA5L1-005 45416854-45418593 retained_intron
  ENST00000533841 SPATA5L1-006 45417695-45421337 processed_transcript
  ENST00000559860 SPATA5L1-007 45402370-45415905 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305560ENST00000531624ENST00000531970ENST00000533199ENST00000533841ENST00000559860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305560 0.870±0.00 N/A 0.781±0.00 0.591±0.34 1.181±0.83 1.711±0.62 0.776±0.10 3.204±0.00 1.274±0.00 1.430±0.19 2.493±0.00 2.742±0.92 1.722±0.61 3.166±0.00
ENST00000531624 N/A 0.967±0.00 N/A N/A N/A N/A N/A 1.922±0.00 N/A N/A N/A 6.842±4.69 6.651±0.00 4.519±0.00
ENST00000531970 1.045±0.00 1.363±0.00 N/A 0.488±0.11 0.299±0.00 N/A 0.852±0.00 0.591±0.12 0.993±0.09 N/A N/A 1.559±1.01 0.475±0.14 1.282±0.15
ENST00000533199 N/A N/A N/A N/A 1.264±0.00 1.663±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.858±0.00 N/A N/A N/A
ENST00000559860 N/A N/A 0.895±0.00 N/A 1.004±0.00 1.103±0.00 N/A N/A 0.787±0.00 0.752±0.00 0.460±0.00 4.840±0.00 1.624±0.00 1.116±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QP CIL_0004QP_0002 CGP 15:45402331-45448761

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061763 spata5l1 spermatogenesis associated 5-like 1 protein_coding Danio_rerio

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