C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ninjurin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171840 NINJ2 9606 - 12:564296-663779 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305108 NINJ2-001 564296-663779 protein_coding
  ENST00000397265 NINJ2-003 564376-610418 protein_coding
  ENST00000433832 NINJ2-002 565360-643636 protein_coding
  ENST00000537416 NINJ2-004 565833-643685 processed_transcript
  ENST00000542920 NINJ2-005 564581-643665 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000305108ENST00000397265ENST00000542920
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000305108 N/A N/A 3.283±1.72 N/A N/A N/A N/A N/A N/A 1.502±0.00 1.267±0.06 1.513±0.00
ENST00000397265 5.202±0.00 N/A 10.598±0.00 N/A 0.765±0.44 3.021±0.00 1.130±0.00 3.649±0.00 8.128±0.00 6.063±0.00 2.565±0.46 2.152±0.00
ENST00000542920 6.661±0.00 6.370±0.00 6.368±0.00 6.235±0.00 N/A N/A N/A N/A N/A 2.373±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083Y CIL_00083Y_0001 VISTA 12:106900-709490
CIL_0008AW CIL_0008AW_0001 VISTA 12:291137-892234

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 TAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007158 TAS neuron cell-cell adhesion
GO:0007399 TAS nervous system development
GO:0016021 IEA integral component of membrane
GO:0042246 IEA tissue regeneration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079824 ninj2 ninjurin 2 protein_coding Danio_rerio
ENSMUSG00000041377 Ninj2 ninjurin 2 protein_coding Mus_musculus

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