C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SLIT-ROBO Rho GTPase activating protein 2C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171943 SRGAP2C 9606 + 1:121184810-121392822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304465 SRGAP2C-201 121187102-121387966 protein_coding
  ENST00000367123 SRGAP2C-001 121184810-121392822 protein_coding
  ENST00000412759 SRGAP2C-003 121185368-121187361 processed_transcript
  ENST00000613462 SRGAP2C-004 121185382-121187295 processed_transcript
  ENST00000617209 SRGAP2C-002 121184811-121187305 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367123
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367123 1.019±0.00 0.617±0.00 0.231±0.00 1.397±0.00 0.745±0.21 0.448±0.14 0.222±0.08 0.752±0.48 0.371±0.18 1.046±0.18 0.086±0.02 0.552±0.38 0.889±0.15 0.475±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0021816 IDA extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration
GO:0030001 IEA metal ion transport
GO:0042803 IPI protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0046982 IPI protein heterodimerization activity
GO:0051490 IDA negative regulation of filopodium assembly
GO:0061000 IDA negative regulation of dendritic spine development
GO:2001224 IDA positive regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032161 srgap2a SLIT-ROBO Rho GTPase activating protein 2a protein_coding Danio_rerio
ENSMUSG00000026425 Srgap2 SLIT-ROBO Rho GTPase activating protein 2 protein_coding Mus_musculus

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