C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forkhead box B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171956 FOXB1 9606 + 15:60004222-60061730 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000396057 FOXB1-001 60004222-60007441 protein_coding
  ENST00000558693 FOXB1-003 60036130-60041899 processed_transcript
  ENST00000560857 FOXB1-002 60004234-60061730 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartOvaryPlacentaTestisENST00000396057ENST00000558693ENST00000560857
Transcript ID Brain Heart Ovary Placenta Testis
ENST00000396057 0.011±0.00 0.010±0.00 0.105±0.09 0.484±0.17 0.584±0.05
ENST00000558693 N/A N/A N/A N/A 1.548±0.00
ENST00000560857 0.023±0.00 N/A 0.084±0.00 N/A 0.587±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LQ CIL_0007LQ_0001 UCNEbase 15:59905203-60532122

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001655 IEA urogenital system development
GO:0001756 ISS somitogenesis
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007412 ISS axon target recognition
GO:0007595 ISS lactation
GO:0008542 ISS visual learning
GO:0021510 IEA spinal cord development
GO:0021767 ISS mammillary body development
GO:0021794 IEA thalamus development
GO:0021855 ISS hypothalamus cell migration
GO:0022029 ISS telencephalon cell migration
GO:0030901 ISS midbrain development
GO:0033504 ISS floor plate development
GO:0043524 ISS negative regulation of neuron apoptotic process
GO:0043565 ISS:IEA sequence-specific DNA binding
GO:0061030 ISS epithelial cell differentiation involved in mammary gland alveolus development
GO:0061374 ISS mammillothalamic axonal tract development
GO:0061377 ISS mammary gland lobule development
GO:0061379 ISS inferior colliculus development
GO:0061381 ISS cell migration in diencephalon

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000059246 Foxb1 forkhead box B1 protein_coding Mus_musculus

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