C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 20 open reading frame 196
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171984 C20orf196 9606 + 20:5750393-5863912 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303142 C20orf196-001 5750397-5863912 protein_coding
  ENST00000378979 C20orf196-005 5750393-5773447 protein_coding
  ENST00000442185 C20orf196-003 5750453-5863304 protein_coding
  ENST00000445603 C20orf196-004 5750437-5863208 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303142ENST00000378979ENST00000442185ENST00000445603
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303142 0.300±0.00 2.662±0.00 N/A 1.111±0.19 0.643±0.47 2.189±0.00 0.398±0.35 0.606±0.50 0.127±0.08 0.290±0.00 1.320±1.15 2.803±1.96 2.364±1.69 1.424±0.81
ENST00000378979 0.432±0.00 1.340±0.00 0.334±0.00 N/A 0.826±0.00 1.655±0.00 0.722±0.00 0.796±0.00 0.334±0.00 0.711±0.06 0.424±0.26 3.851±0.00 0.774±0.24 0.717±0.28
ENST00000442185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.454±0.00 N/A
ENST00000445603 1.051±0.00 1.865±0.00 0.146±0.00 0.583±0.18 0.520±0.00 0.355±0.00 N/A N/A N/A 0.257±0.00 N/A 0.774±0.56 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057F CIL_00057F_0001 CGP 20:5544439-5863912
CIL_0005V9 CIL_0005V9_0001 CGP 20:5750393-5925361

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000044991 1110034G24Rik RIKEN cDNA 1110034G24 gene protein_coding Mus_musculus

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