C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172061 LRRC15 9606 - 3:194355247-194369743 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000347624 LRRC15-001 194355247-194369743 protein_coding
  ENST00000428839 LRRC15-002 194357927-194369731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000347624ENST00000428839
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000347624 0.041±0.00 0.082±0.00 0.027±0.00 0.635±0.41 0.167±0.15 0.102±0.00 0.025±0.00 0.070±0.04 0.465±0.00 0.020±0.00 0.956±0.63 2.357±1.30 0.126±0.02
ENST00000428839 N/A N/A 0.025±0.01 N/A 0.048±0.00 N/A 0.057±0.04 N/A 0.011±0.00 N/A 0.167±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A1 CIL_0009A1_0001 VISTA 3:193911571-194513668
CIL_0000NA CIL_0000NA_0001 CGP 3:194339765-194369743
CIL_0000N9 CIL_0000N9_0001 CGP 3:194355247-194398354

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001968 IDA fibronectin binding
GO:0005515 IEA protein binding
GO:0005518 IDA collagen binding
GO:0016021 IEA integral component of membrane
GO:0030335 IMP positive regulation of cell migration
GO:0043236 IDA laminin binding
GO:0046813 IMP receptor-mediated virion attachment to host cell
GO:0070062 IDA extracellular vesicular exosome
GO:0090005 IMP negative regulation of establishment of protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070792 lrrc15 leucine rich repeat containing 15 protein_coding Danio_rerio
ENSMUSG00000052316 Lrrc15 leucine rich repeat containing 15 protein_coding Mus_musculus

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