C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: StAR-related lipid transfer (START) domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172345 STARD5 9606 - 15:81309053-81324183 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302824 STARD5-001 81309053-81324125 protein_coding
  ENST00000325346 STARD5-002 81312668-81324183 nonsense_mediated_decay
  ENST00000559913 STARD5-005 81319400-81324141 processed_transcript
  ENST00000560156 STARD5-004 81319351-81324141 nonsense_mediated_decay
  ENST00000560723 STARD5-003 81312667-81324141 retained_intron
  ENST00000560916 STARD5-006 81309356-81310139 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302824ENST00000325346ENST00000560723
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302824 0.821±0.00 0.189±0.00 2.009±0.00 0.995±0.27 0.169±0.00 0.412±0.00 N/A 3.864±1.64 0.048±0.00 1.139±0.84 1.482±0.37 1.941±0.10
ENST00000325346 N/A N/A N/A N/A N/A 1.281±0.00 31.449±0.00 N/A N/A 2.208±0.00 4.541±0.64 N/A
ENST00000560723 N/A 0.229±0.00 N/A 3.101±0.00 N/A 0.595±0.00 N/A N/A N/A 1.033±0.00 N/A 1.608±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0001 VISTA 15:80790387-81397930
CIL_00052A CIL_00052A_0002 CGP 15:81159575-81324183

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0006700 TAS C21-steroid hormone biosynthetic process
GO:0006869 IEA lipid transport
GO:0008202 TAS steroid metabolic process
GO:0008289 IEA lipid binding
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076117 STARD5 StAR-related lipid transfer (START) domain containing 5 protein_coding Danio_rerio
ENSMUSG00000046027 Stard5 StAR-related lipid transfer (START) domain containing 5 protein_coding Mus_musculus

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