C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of calcineurin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172348 RCAN2 9606 - 6:46220736-46491972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306764 RCAN2-003 46220738-46491972 protein_coding
  ENST00000330430 RCAN2-001 46220736-46325668 protein_coding
  ENST00000371374 RCAN2-002 46220738-46491362 protein_coding
  ENST00000405162 RCAN2-201 46221468-46325672 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306764ENST00000330430ENST00000371374ENST00000405162
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306764 N/A 2.160±0.00 N/A N/A N/A 1.879±0.00 N/A N/A N/A N/A N/A 3.446±0.00 0.632±0.00 2.518±0.00
ENST00000330430 N/A N/A 0.630±0.00 24.491±6.16 2.545±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371374 9.831±0.00 9.607±0.00 2.267±0.00 22.795±12.04 3.464±1.21 6.830±4.65 62.158±49.73 7.096±6.63 4.533±3.70 6.775±5.08 9.064±7.20 4.270±3.22 0.450±0.34 10.153±8.22
ENST00000405162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00 0.108±0.04 0.627±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YF CIL_0008YF_0001 VISTA 6:45752763-46354264
CIL_000084 CIL_000084_0002 CGP 6:46220736-46652830

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005575 ND cellular_component
GO:0006979 IEA response to oxidative stress
GO:0007614 IEA short-term memory
GO:0019722 IEA calcium-mediated signaling
GO:0031987 IEA locomotion involved in locomotory behavior
GO:0033173 IEA calcineurin-NFAT signaling cascade

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021869 rcan2 regulator of calcineurin 2 protein_coding Danio_rerio
ENSMUSG00000039601 Rcan2 regulator of calcineurin 2 protein_coding Mus_musculus

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