C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB40A, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172476 RAB40A 9606 - X:103499750-103519489 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304236 RAB40A-001 103499754-103519489 protein_coding
  ENST00000372633 RAB40A-002 103499750-103502875 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000304236ENST00000372633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000304236 N/A 0.128±0.00 0.237±0.00 0.321±0.17 0.304±0.21 0.088±0.00 0.073±0.00 0.233±0.00 0.479±0.46 N/A 0.027±0.00 0.388±0.00 0.594±0.00
ENST00000372633 0.048±0.00 0.269±0.00 0.702±0.00 0.138±0.01 0.245±0.13 0.032±0.00 0.126±0.10 0.192±0.02 0.368±0.36 0.620±0.27 0.191±0.10 0.131±0.03 0.271±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042410 rab40b RAB40B, member RAS oncogene family protein_coding Danio_rerio
ENSMUSG00000025170 Rab40b Rab40B, member RAS oncogene family protein_coding Mus_musculus

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