C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 71, member D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172717 FAM71D 9606 + 14:67189393-67228550 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311864 FAM71D-001 67189429-67228550 nonsense_mediated_decay
  ENST00000524532 FAM71D-005 67189393-67203130 protein_coding
  ENST00000524914 FAM71D-012 67189443-67200560 nonsense_mediated_decay
  ENST00000530728 FAM71D-004 67189440-67203167 protein_coding
  ENST00000531566 FAM71D-006 67197289-67203287 processed_transcript
  ENST00000534174 FAM71D-003 67189461-67228545 nonsense_mediated_decay
  ENST00000554500 FAM71D-010 67227471-67228544 processed_transcript
  ENST00000556046 FAM71D-009 67196774-67223940 nonsense_mediated_decay
  ENST00000556117 FAM71D-007 67204948-67223940 protein_coding
  ENST00000557671 FAM71D-008 67208317-67224828 protein_coding
  ENST00000612183 FAM71D-201 67189393-67228550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverPlacentaTestisENST00000311864ENST00000524532ENST00000524914ENST00000530728ENST00000534174ENST00000554500ENST00000556046ENST00000556117ENST00000557671
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Placenta Testis
ENST00000311864 N/A N/A N/A N/A N/A N/A N/A N/A 2.796±0.00
ENST00000524532 0.148±0.00 0.025±0.00 N/A N/A N/A 0.192±0.00 N/A N/A N/A
ENST00000524914 N/A N/A N/A 0.011±0.00 N/A N/A 0.058±0.00 0.031±0.00 2.572±0.00
ENST00000530728 N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000534174 0.049±0.00 N/A N/A 0.034±0.00 N/A N/A N/A N/A 7.352±0.00
ENST00000554500 N/A N/A 0.102±0.00 N/A 0.018±0.00 0.072±0.00 N/A 0.106±0.00 N/A
ENST00000556046 N/A 0.019±0.00 N/A 0.050±0.00 N/A N/A N/A N/A 5.544±0.00
ENST00000556117 N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A
ENST00000557671 N/A 0.033±0.00 N/A N/A N/A N/A 0.030±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010J CIL_00010J_0001 CGP 14:66507407-67228550
CIL_00010I CIL_00010I_0001 CGP 14:67189393-67335819

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000056987 Fam71d family with sequence similarity 71, member D protein_coding Mus_musculus

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