C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fatty acid desaturase 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172782 FADS6 9606 - 17:74877299-74893781 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000413142 FADS6-002 74877918-74882884 retained_intron
  ENST00000579663 FADS6-003 74879042-74882704 protein_coding
  ENST00000612771 FADS6-001 74877299-74893610 protein_coding
  ENST00000614223 FADS6-201 74877352-74893607 protein_coding
  ENST00000621859 FADS6-004 74882586-74893781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413142ENST00000579663ENST00000612771ENST00000614223
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413142 N/A N/A 0.306±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.316±0.23 0.063±0.00 N/A
ENST00000579663 0.048±0.00 0.276±0.00 0.724±0.00 0.518±0.00 0.254±0.00 0.051±0.00 0.097±0.00 0.164±0.00 0.171±0.00 0.205±0.00 0.022±0.00 0.166±0.13 N/A 0.454±0.17
ENST00000612771 0.054±0.00 0.244±0.00 N/A 0.379±0.00 0.089±0.00 N/A 0.046±0.00 N/A 0.301±0.00 0.127±0.00 N/A 0.083±0.00 N/A 1.073±0.00
ENST00000614223 N/A N/A N/A 1.531±0.00 N/A 0.072±0.00 0.057±0.00 0.330±0.17 0.856±0.00 N/A 0.011±0.00 0.239±0.04 N/A 0.235±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008P CIL_00008P_0001 CGP 17:74862497-74893781

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006629 IEA lipid metabolic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091503 CABZ01073954.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000044788 Fads6 fatty acid desaturase domain family, member 6 protein_coding Mus_musculus

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