Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000172850	LSM2	9606	-	CHR_HSCHR6_MHC_QBL_CTG1:31787629-31797209	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000383391		LSM2-001	31787629-31797209	protein_coding
	ENST00000462194		LSM2-004	31787629-31797042	processed_transcript
	ENST00000474334		LSM2-005	31787629-31796885	processed_transcript
	ENST00000477511		LSM2-006	31787629-31796884	processed_transcript
	ENST00000482154		LSM2-003	31787629-31797077	processed_transcript
	ENST00000482823		LSM2-007	31792985-31796827	processed_transcript
	ENST00000483171		LSM2-002	31787629-31797191	processed_transcript

Expression Patterns

No expression data.

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000288	TAS	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000398	IC	mRNA splicing, via spliceosome
GO:0005515	IPI	protein binding
GO:0005654	TAS	nucleoplasm
GO:0005829	TAS	cytosol
GO:0006397	IEA	mRNA processing
GO:0008380	TAS	RNA splicing
GO:0010467	TAS	gene expression
GO:0016070	TAS	RNA metabolic process
GO:0016071	TAS	mRNA metabolic process
GO:0017070	NAS	U6 snRNA binding
GO:0043928	TAS	exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
GO:0044822	IDA	poly(A) RNA binding
GO:0071013	IDA	catalytic step 2 spliceosome

No Homologs available.
Homologs

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