C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172867 KRT2 9606 - 12:52644558-52652164 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309680 KRT2-001 52644558-52652164 protein_coding
  ENST00000547106 KRT2-002 52648208-52650672 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungOvaryTestisENST00000309680ENST00000547106
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Ovary Testis
ENST00000309680 2.268±0.00 0.073±0.00 0.014±0.00 0.045±0.00 0.387±0.00 0.128±0.00 N/A 0.040±0.02 0.024±0.00
ENST00000547106 N/A 0.207±0.00 N/A 0.026±0.00 0.229±0.00 N/A 0.044±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000J CGP 12:52607570-52652164
CIL_00033Q CIL_00033Q_000G CGP 12:52644558-52680407

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005882 TAS:IEA intermediate filament
GO:0008544 TAS epidermis development
GO:0016020 IDA membrane
GO:0031424 IDA keratinization
GO:0032980 IDA keratinocyte activation
GO:0043616 IDA keratinocyte proliferation
GO:0045095 IEA keratin filament
GO:0045111 IDA intermediate filament cytoskeleton
GO:0051546 IDA keratinocyte migration
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017624 krt4 keratin 4 protein_coding Danio_rerio
ENSDARG00000043242 si:dkey-222f2.1 si:dkey-222f2.1 protein_coding Danio_rerio
ENSDARG00000058358 krt8 keratin 8 protein_coding Danio_rerio
ENSDARG00000058371 krt5 keratin 5 protein_coding Danio_rerio
ENSDARG00000058462 zgc:158846 zgc:158846 protein_coding Danio_rerio
ENSMUSG00000064201 Krt2 keratin 2 protein_coding Mus_musculus

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