C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 680
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173041 ZNF680 9606 - 7:64519884-64563106 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309683 ZNF680-001 64519884-64563106 protein_coding
  ENST00000447137 ZNF680-004 64524699-64563041 protein_coding
  ENST00000470847 ZNF680-005 64522450-64544219 retained_intron
  ENST00000473601 ZNF680-002 64544346-64563075 processed_transcript
  ENST00000476563 ZNF680-003 64521926-64563022 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309683ENST00000447137ENST00000473601ENST00000476563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309683 N/A 0.927±0.00 1.052±0.00 2.710±0.63 1.785±0.29 1.944±0.00 1.751±0.36 2.010±0.93 1.507±0.49 1.511±0.00 N/A 1.908±0.92 0.480±0.10 0.733±0.43
ENST00000447137 0.229±0.00 N/A 1.366±0.00 3.470±2.13 1.297±0.90 2.179±0.00 2.775±1.38 3.448±0.00 4.247±0.00 2.595±0.00 0.712±0.01 0.250±0.00 N/A 0.284±0.00
ENST00000473601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.039±0.00 N/A N/A N/A
ENST00000476563 N/A N/A 2.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064B CIL_00064B_0008 CGP 7:64307459-64563106
CIL_0006CF CIL_0006CF_0002 CGP 7:64519884-64711582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000052909 Gm9894 predicted gene 9894 protein_coding Mus_musculus
ENSMUSG00000071281 Zfp65 zinc finger protein 65 protein_coding Mus_musculus
ENSMUSG00000074824 Rslcan18 regulator of sex-limitation candidate 18 protein_coding Mus_musculus
ENSMUSG00000090659 Zfp493 zinc finger protein 493 protein_coding Mus_musculus

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