C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oxidized low density lipoprotein (lectin-like) receptor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173391 OLR1 9606 - 12:10158301-10172138 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309539 OLR1-001 10158301-10172138 protein_coding
  ENST00000339968 OLR1-010 10160402-10167599 protein_coding
  ENST00000432556 OLR1-002 10159667-10172132 protein_coding
  ENST00000536989 OLR1-014 10159668-10160561 retained_intron
  ENST00000538745 OLR1-009 10160347-10167663 protein_coding
  ENST00000538873 OLR1-013 10160867-10167168 protein_coding
  ENST00000539518 OLR1-007 10159901-10169182 protein_coding
  ENST00000543414 OLR1-006 10160878-10170387 protein_coding
  ENST00000543993 OLR1-005 10159584-10167599 protein_coding
  ENST00000544577 OLR1-003 10159515-10172138 protein_coding
  ENST00000545927 OLR1-008 10159618-10172117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000309539ENST00000339968ENST00000432556ENST00000536989ENST00000538873ENST00000539518ENST00000544577
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000309539 N/A 0.076±0.00 0.975±0.16 0.415±0.00 N/A 0.077±0.02 1.003±0.00 N/A 12.622±3.87 N/A 37.530±19.81 0.224±0.01
ENST00000339968 0.343±0.00 0.575±0.00 N/A 0.330±0.00 N/A 0.219±0.00 N/A 0.071±0.00 N/A N/A N/A 0.456±0.00
ENST00000432556 N/A N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A
ENST00000536989 N/A N/A N/A N/A 0.611±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000538873 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.305±0.00 N/A N/A
ENST00000539518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.607±0.00
ENST00000544577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.607±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T7 CIL_0000T7_0001 CGP 12:10116777-10172138
CIL_0000T6 CIL_0000T6_0001 CGP 12:10158301-10191801

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005041 IEA low-density lipoprotein receptor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006508 TAS proteolysis
GO:0006898 IEA receptor-mediated endocytosis
GO:0006954 IEA inflammatory response
GO:0007159 IEA leukocyte cell-cell adhesion
GO:0007596 TAS blood coagulation
GO:0008015 TAS blood circulation
GO:0008219 IEA cell death
GO:0016020 TAS membrane
GO:0030246 IEA carbohydrate binding
GO:0042157 IEA lipoprotein metabolic process
GO:0042542 IEA response to hydrogen peroxide
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043235 IDA receptor complex
GO:0050900 TAS leukocyte migration
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030162 Olr1 oxidized low density lipoprotein (lectin-like) receptor 1 protein_coding Mus_musculus

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