C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ARV1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173409 ARV1 9606 + 1:230978981-231000595 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310256 ARV1-001 230979049-231000595 protein_coding
  ENST00000366658 ARV1-003 230979094-231000595 protein_coding
  ENST00000435927 ARV1-005 230979146-230997267 protein_coding
  ENST00000450711 ARV1-007 230979116-230999803 protein_coding
  ENST00000459891 ARV1-006 230995760-231000595 nonsense_mediated_decay
  ENST00000480519 ARV1-002 230979111-230999867 nonsense_mediated_decay
  ENST00000497753 ARV1-004 230978981-230997154 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310256ENST00000366658ENST00000435927ENST00000459891ENST00000480519
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310256 2.886±0.00 5.844±0.00 0.535±0.00 6.996±2.43 4.564±0.00 0.819±0.00 4.739±2.39 7.509±0.00 2.597±0.59 3.174±0.00 0.903±0.00 4.807±2.35 3.225±0.53 15.007±1.16
ENST00000366658 1.525±0.00 N/A 1.696±0.00 2.830±0.11 3.961±0.00 4.746±0.31 0.535±0.00 4.514±1.06 4.184±0.00 2.823±0.00 2.025±0.00 N/A 1.476±0.00 N/A
ENST00000435927 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.663±0.00 1.307±0.00 N/A N/A N/A
ENST00000459891 N/A 1.789±0.00 N/A N/A N/A N/A N/A N/A 0.383±0.00 N/A N/A N/A N/A N/A
ENST00000480519 0.739±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235
CIL_000614 CIL_000614_0001 CGP 1:230906243-231000595
CIL_000618 CIL_000618_0001 CGP 1:230978981-231040246

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006665 IEA sphingolipid metabolic process
GO:0008206 IEA bile acid metabolic process
GO:0016021 IEA integral component of membrane
GO:0030301 IEA cholesterol transport
GO:0090181 IEA regulation of cholesterol metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074757 arv1 ARV1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000031982 Arv1 ARV1 homolog (yeast) protein_coding Mus_musculus

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