C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173535 TNFRSF10C 9606 + 8:23084355-23117437 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356864 TNFRSF10C-001 23102590-23117437 protein_coding
  ENST00000397703 TNFRSF10C-002 23084355-23103558 protein_coding
  ENST00000517558 TNFRSF10C-004 23102921-23117050 nonsense_mediated_decay
  ENST00000518135 TNFRSF10C-005 23114507-23116674 retained_intron
  ENST00000520607 TNFRSF10C-003 23084403-23115536 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356864ENST00000397703ENST00000517558ENST00000518135ENST00000520607
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356864 1.075±0.00 0.864±0.00 0.276±0.00 0.291±0.00 0.473±0.00 0.027±0.00 0.146±0.03 0.988±0.00 0.421±0.26 1.888±0.62 0.099±0.00 0.715±0.29 N/A 0.517±0.00
ENST00000397703 N/A 0.255±0.00 N/A 0.214±0.00 0.608±0.00 0.117±0.00 N/A 0.385±0.00 N/A N/A N/A 0.367±0.00 N/A 0.228±0.00
ENST00000517558 0.986±0.00 0.482±0.00 0.254±0.00 0.102±0.00 0.226±0.00 0.105±0.00 N/A 1.462±0.00 0.374±0.00 2.169±0.78 N/A 0.600±0.15 4.053±1.35 0.604±0.00
ENST00000518135 N/A N/A N/A N/A 1.375±0.00 N/A N/A N/A 0.306±0.00 N/A N/A N/A N/A N/A
ENST00000520607 N/A N/A N/A 0.070±0.00 N/A N/A N/A 0.402±0.00 N/A N/A N/A 0.707±0.00 N/A 0.364±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005515 IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006915 IEA apoptotic process
GO:0007165 TAS signal transduction
GO:0031225 IEA anchored component of membrane
GO:0045569 IEA TRAIL binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004392 hdr hematopoietic death receptor protein_coding Danio_rerio
ENSDARG00000004451 tnfrsfa tumor necrosis factor receptor superfamily, member a protein_coding Danio_rerio
ENSMUSG00000022074 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b protein_coding Mus_musculus

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