C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium voltage-gated channel, subfamily H (eag-related), member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173826 KCNH6 9606 + 17:63523334-63548977 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314672 KCNH6-001 63523361-63546034 protein_coding
  ENST00000456941 KCNH6-201 63523334-63546032 protein_coding
  ENST00000580652 KCNH6-003 63523357-63536213 protein_coding
  ENST00000581784 KCNH6-002 63523334-63548977 protein_coding
  ENST00000583023 KCNH6-005 63523403-63546727 protein_coding
  ENST00000583465 KCNH6-004 63523359-63546076 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000314672ENST00000456941ENST00000580652ENST00000581784ENST00000583023ENST00000583465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000314672 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A
ENST00000456941 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A
ENST00000580652 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 0.049±0.00 N/A
ENST00000581784 0.087±0.00 0.195±0.00 0.119±0.00 0.148±0.00 0.075±0.00 0.104±0.00 0.047±0.00 0.026±0.00 0.379±0.00 0.012±0.00 0.108±0.00 0.164±0.00
ENST00000583023 0.051±0.00 0.169±0.00 0.160±0.00 0.031±0.00 0.093±0.00 N/A 0.056±0.00 0.006±0.00 N/A 0.057±0.01 0.033±0.00 0.159±0.02
ENST00000583465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006ZT CIL_0006ZT_0001 CGP 17:63523334-63594266

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005216 IEA ion channel activity
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005886 TAS plasma membrane
GO:0005887 IBA integral component of plasma membrane
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006811 IEA ion transport
GO:0007165 IEA signal transduction
GO:0007268 TAS synaptic transmission
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042391 IBA regulation of membrane potential
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010296 KCNH7 (2 of 6) potassium voltage-gated channel, subfamily H (eag-related), member 6 protein_coding Danio_rerio
ENSMUSG00000001901 Kcnh6 potassium voltage-gated channel, subfamily H (eag-related), member 6 protein_coding Mus_musculus

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