C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox B2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173917 HOXB2 9606 - 17:48540894-48544989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330070 HOXB2-001 48542655-48544989 protein_coding
  ENST00000504772 HOXB2-003 48540894-48543146 processed_transcript
  ENST00000571287 HOXB2-002 48543159-48543909 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330070ENST00000571287
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330070 11.883±0.00 5.562±0.00 N/A 9.630±0.00 17.931±0.00 1.526±0.00 26.291±0.00 1.126±0.00 11.102±0.00 2.406±0.00 5.407±1.51 3.286±0.35 9.446±0.00
ENST00000571287 N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002011 IEA morphogenesis of an epithelial sheet
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 TAS multicellular organismal development
GO:0008015 TAS blood circulation
GO:0009952 IEA anterior/posterior pattern specification
GO:0009953 IEA dorsal/ventral pattern formation
GO:0021569 IEA rhombomere 3 development
GO:0021570 IEA rhombomere 4 development
GO:0021612 IEA facial nerve structural organization
GO:0043565 IEA sequence-specific DNA binding
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0048705 IEA skeletal system morphogenesis
GO:0048857 IEA neural nucleus development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000175 hoxb2a homeo box B2a protein_coding Danio_rerio
ENSMUSG00000075588 Hoxb2 homeobox B2 protein_coding Mus_musculus

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