C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glomulin, FKBP associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174842 GLMN 9606 - 1:92246402-92298987 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370360 GLMN-001 92246402-92298976 protein_coding
  ENST00000463560 GLMN-005 92262865-92286592 protein_coding
  ENST00000471465 GLMN-006 92246492-92248408 retained_intron
  ENST00000487911 GLMN-003 92297521-92298987 retained_intron
  ENST00000495106 GLMN-002 92246490-92298987 nonsense_mediated_decay
  ENST00000495852 GLMN-004 92247062-92271652 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyOvaryPlacentaTestisENST00000370360ENST00000463560ENST00000495106
Transcript ID Adipose Brain Colon Heart Kidney Ovary Placenta Testis
ENST00000370360 1.044±0.00 1.711±0.00 1.288±0.00 N/A N/A 2.227±0.28 1.157±0.05 3.272±0.00
ENST00000463560 N/A N/A N/A N/A N/A N/A 5.954±0.00 14.560±0.00
ENST00000495106 N/A N/A N/A 2.067±0.00 1.210±0.00 3.432±0.00 1.833±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CA CIL_0007CA_0002 CGP 1:92217940-92298987
CIL_0005ZN CIL_0005ZN_0001 CGP 1:92246402-92402056

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001570 IMP vasculogenesis
GO:0001843 IEA neural tube closure
GO:0005171 IPI hepatocyte growth factor receptor binding
GO:0005515 IPI protein binding
GO:0005622 NAS intracellular
GO:0031397 IGI negative regulation of protein ubiquitination
GO:0031461 IPI cullin-RING ubiquitin ligase complex
GO:0031462 IPI Cul2-RING ubiquitin ligase complex
GO:0031463 IPI Cul3-RING ubiquitin ligase complex
GO:0031464 IPI Cul4A-RING E3 ubiquitin ligase complex
GO:0031625 IDA ubiquitin protein ligase binding
GO:0032434 IMP regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0040029 IMP regulation of gene expression, epigenetic
GO:0042130 IDA negative regulation of T cell proliferation
GO:0042327 IDA positive regulation of phosphorylation
GO:0042692 IMP muscle cell differentiation
GO:0045086 IMP positive regulation of interleukin-2 biosynthetic process
GO:0050715 IMP positive regulation of cytokine secretion
GO:0055105 IGI ubiquitin-protein transferase inhibitor activity
GO:0072359 IEA circulatory system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010958 glmnb glomulin, FKBP associated protein b protein_coding Danio_rerio
ENSDARG00000058267 glmna glomulin, FKBP associated protein a protein_coding Danio_rerio
ENSMUSG00000029276 Glmn glomulin, FKBP associated protein protein_coding Mus_musculus

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