C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trans-golgi network vesicle protein 23 homolog C (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175106 TVP23C 9606 - 17:15502264-15563595 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000225576 TVP23C-001 15502264-15563544 protein_coding
  ENST00000419890 TVP23C-014 15540502-15563468 protein_coding
  ENST00000428082 TVP23C-020 15536981-15563595 protein_coding
  ENST00000438826 TVP23C-002 15536981-15563536 protein_coding
  ENST00000518321 TVP23C-004 15540083-15563587 protein_coding
  ENST00000521179 TVP23C-013 15538033-15563472 nonsense_mediated_decay
  ENST00000523573 TVP23C-011 15537901-15563448 nonsense_mediated_decay
  ENST00000581273 TVP23C-022 15506872-15545916 nonsense_mediated_decay
  ENST00000583206 TVP23C-023 15538981-15540171 processed_transcript
  ENST00000584811 TVP23C-018 15536980-15563428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000225576ENST00000428082ENST00000438826ENST00000518321ENST00000581273ENST00000583206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000225576 1.326±0.00 N/A N/A N/A N/A 1.389±0.00 N/A 1.324±0.00 0.691±0.00 1.867±0.00 N/A 1.355±0.00 0.923±0.15 3.894±0.00
ENST00000428082 N/A N/A N/A 0.906±0.00 N/A N/A 0.358±0.00 N/A N/A 1.476±0.00 N/A 2.656±0.00 N/A N/A
ENST00000438826 N/A N/A N/A N/A 2.977±0.00 N/A N/A 1.245±0.00 N/A N/A N/A N/A N/A N/A
ENST00000518321 N/A N/A 3.227±0.00 1.881±0.00 3.803±0.00 2.127±0.00 0.601±0.00 N/A N/A N/A N/A 5.300±0.00 N/A N/A
ENST00000581273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.460±0.00 N/A N/A N/A
ENST00000583206 2.017±0.00 7.110±0.00 N/A 3.236±0.00 4.165±0.00 1.952±0.00 1.538±0.00 2.290±0.00 N/A N/A 0.443±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0001 VISTA 17:15144744-15748248

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001804 zgc:112148 zgc:112148 protein_coding Danio_rerio
ENSDARG00000057060 tvp23b trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) protein_coding Danio_rerio

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