C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175110 MRPS22 9606 + 3:139005806-139357223 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310776 MRPS22-201 139344019-139357043 protein_coding
  ENST00000465056 MRPS22-005 139344027-139357033 protein_coding
  ENST00000465373 MRPS22-008 139344039-139350259 protein_coding
  ENST00000466690 MRPS22-010 139344041-139351062 nonsense_mediated_decay
  ENST00000478464 MRPS22-007 139344565-139357014 protein_coding
  ENST00000480644 MRPS22-012 139348282-139352792 protein_coding
  ENST00000480938 MRPS22-003 139344027-139357051 retained_intron
  ENST00000483545 MRPS22-011 139346966-139351156 retained_intron
  ENST00000486705 MRPS22-009 139344116-139348507 retained_intron
  ENST00000489521 MRPS22-013 139281714-139344023 processed_transcript
  ENST00000492644 MRPS22-002 139350870-139357046 retained_intron
  ENST00000495075 MRPS22-001 139005806-139357046 protein_coding
  ENST00000495225 MRPS22-014 139110404-139346950 protein_coding
  ENST00000498505 MRPS22-004 139344022-139357223 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000310776
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000310776 15.377±0.00 14.617±0.00 13.511±0.00 14.777±0.00 15.516±5.36 23.816±2.05 24.929±0.00 19.423±7.71 18.822±0.00 17.520±0.00 23.085±2.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R4 CIL_0002R4_0001 CGP 3:139005806-139357223

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IDA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005761 NAS mitochondrial ribosome
GO:0005763 IDA mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018073 mrps22 mitochondrial ribosomal protein S22 protein_coding Danio_rerio
ENSDARG00000090838 mrps22 mitochondrial ribosomal protein S22 protein_coding Danio_rerio
ENSMUSG00000032459 Mrps22 mitochondrial ribosomal protein S22 protein_coding Mus_musculus

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