C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine and glycine-rich protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175183 CSRP2 9606 - 12:76858715-76879060 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311083 CSRP2-001 76858715-76879060 protein_coding
  ENST00000546966 CSRP2-002 76858842-76879023 protein_coding
  ENST00000547435 CSRP2-006 76859469-76878985 protein_coding
  ENST00000547557 CSRP2-004 76865669-76878997 retained_intron
  ENST00000548783 CSRP2-003 76858716-76864954 retained_intron
  ENST00000551725 CSRP2-007 76866105-76878974 retained_intron
  ENST00000552330 CSRP2-005 76858829-76878991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311083ENST00000546966ENST00000548783
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311083 25.290±0.00 37.803±0.00 15.033±0.00 14.793±7.11 10.735±2.51 21.355±17.94 8.098±0.58 31.933±24.45 12.556±1.84 32.049±26.78 3.170±1.06 15.798±5.67 56.354±16.58 26.466±11.43
ENST00000546966 N/A N/A N/A N/A N/A 0.905±0.00 N/A 12.637±0.00 N/A N/A 1.496±0.00 6.238±0.00 28.041±0.00 7.387±0.00
ENST00000548783 N/A 0.606±0.00 1.493±0.00 N/A 0.568±0.32 0.156±0.00 0.143±0.00 0.324±0.00 0.778±0.00 N/A 0.059±0.00 0.449±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BC CIL_0002BC_0002 CGP 12:76763588-76879060
CIL_0002BB CIL_0002BB_0002 CGP 12:76858715-77065580

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 NAS nucleus
GO:0005925 IDA focal adhesion
GO:0007275 IEA multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0030154 NAS cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011961 csrp2 cysteine and glycine-rich protein 2 protein_coding Danio_rerio
ENSMUSG00000020186 Csrp2 cysteine and glycine-rich protein 2 protein_coding Mus_musculus

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