C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175215 CTDSP2 9606 - 12:57819927-57846739 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398073 CTDSP2-001 57819927-57846739 protein_coding
  ENST00000547169 CTDSP2-005 57822891-57824543 retained_intron
  ENST00000547701 CTDSP2-004 57823461-57845534 protein_coding
  ENST00000548823 CTDSP2-003 57822800-57846704 protein_coding
  ENST00000549039 CTDSP2-009 57823183-57826402 protein_coding
  ENST00000550144 CTDSP2-006 57823958-57829550 protein_coding
  ENST00000551594 CTDSP2-007 57823653-57846544 nonsense_mediated_decay
  ENST00000552294 CTDSP2-008 57826379-57827407 retained_intron
  ENST00000622025 CTDSP2-201 57823464-57846435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398073ENST00000547169ENST00000548823ENST00000549039ENST00000622025
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398073 12.118±0.00 4.242±0.00 3.046±1.55 10.787±6.83 12.318±7.21 15.421±13.05 18.296±15.73 6.576±2.94 30.982±28.32 18.590±0.00 23.854±15.45 16.709±8.54 6.470±0.00
ENST00000547169 N/A N/A N/A N/A N/A N/A N/A N/A 7.142±0.00 N/A 4.547±0.00 N/A N/A
ENST00000548823 N/A N/A 9.898±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549039 N/A 13.995±0.00 N/A N/A N/A 3.097±0.00 11.438±0.00 15.800±0.00 N/A N/A 22.087±13.73 43.465±0.00 36.052±0.00
ENST00000622025 N/A N/A 4.630±0.00 N/A N/A 3.161±0.00 8.633±0.00 8.453±0.00 10.749±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001933 IEA negative regulation of protein phosphorylation
GO:0005515 IPI:IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006470 IDA protein dephosphorylation
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0008420 IDA CTD phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:2000134 IEA negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036102 ctdsp2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein_coding Danio_rerio
ENSMUSG00000078429 Ctdsp2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein_coding Mus_musculus

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