C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: barrier to autointegration factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175334 BANF1 9606 + 11:66002079-66004149 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312175 BANF1-001 66002079-66004149 protein_coding
  ENST00000445560 BANF1-002 66002228-66004146 protein_coding
  ENST00000524628 BANF1-008 66002480-66004146 processed_transcript
  ENST00000524663 BANF1-007 66002316-66003678 processed_transcript
  ENST00000527348 BANF1-005 66002782-66003898 protein_coding
  ENST00000528648 BANF1-006 66003236-66003893 processed_transcript
  ENST00000530204 BANF1-003 66002256-66003335 protein_coding
  ENST00000533166 BANF1-004 66002581-66004131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312175ENST00000445560ENST00000524628ENST00000528648
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312175 27.754±0.00 44.544±0.00 N/A 21.133±18.34 31.998±0.00 39.222±36.67 22.258±0.00 44.794±0.00 12.391±10.74 31.713±0.00 40.776±0.00 70.728±66.35 31.369±7.82 57.045±17.02
ENST00000445560 N/A N/A N/A N/A N/A N/A 1.115±0.00 N/A N/A N/A 5.391±0.00 31.689±0.00 30.446±3.95 N/A
ENST00000524628 19.155±0.00 53.563±0.00 3.510±0.00 N/A 20.728±17.51 N/A 49.743±0.00 4.778±0.00 24.672±0.00 48.194±0.00 59.415±0.00 97.803±0.00 81.732±2.74 52.727±0.00
ENST00000528648 53.625±0.00 97.153±0.00 N/A 53.965±0.00 73.352±0.00 128.534±0.00 N/A 92.118±0.00 35.587±0.00 55.972±0.00 55.055±0.00 N/A N/A 140.205±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005694 IEA chromosome
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0007084 TAS mitotic nuclear envelope reassembly
GO:0009615 TAS response to virus
GO:0015074 IEA DNA integration
GO:0016032 TAS viral process
GO:0070062 IDA extracellular vesicular exosome
GO:0075713 TAS establishment of integrated proviral latency

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037009 banf1 barrier to autointegration factor 1 protein_coding Danio_rerio
ENSMUSG00000024844 Banf1 barrier to autointegration factor 1 protein_coding Mus_musculus

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