C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (DNA-directed), delta 4, accessory subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175482 POLD4 9606 - 11:67350777-67356972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312419 POLD4-004 67351548-67353546 protein_coding
  ENST00000524743 POLD4-009 67352459-67353595 retained_intron
  ENST00000528087 POLD4-006 67351565-67353490 retained_intron
  ENST00000529000 POLD4-011 67352893-67353534 retained_intron
  ENST00000529704 POLD4-002 67350777-67353579 protein_coding
  ENST00000530584 POLD4-005 67351548-67353518 protein_coding
  ENST00000531239 POLD4-010 67351809-67353534 protein_coding
  ENST00000532830 POLD4-001 67351548-67356972 protein_coding
  ENST00000533429 POLD4-008 67351548-67353078 retained_intron
  ENST00000534515 POLD4-003 67351553-67353561 retained_intron
  ENST00000539074 POLD4-013 67351608-67353514 protein_coding
  ENST00000542982 POLD4-012 67352532-67353525 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312419ENST00000529000ENST00000529704ENST00000530584ENST00000531239ENST00000533429ENST00000542982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312419 32.997±0.00 40.711±0.00 N/A 3.957±2.94 17.415±11.91 22.052±19.13 9.621±0.00 25.808±23.22 27.092±25.84 24.660±22.09 2.165±0.00 18.877±13.53 40.395±29.54 22.852±0.00
ENST00000529000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.245±0.00 N/A N/A N/A
ENST00000529704 N/A N/A N/A 0.423±0.00 N/A 0.602±0.00 0.243±0.00 N/A 0.662±0.00 N/A N/A 2.869±0.00 N/A N/A
ENST00000530584 N/A N/A N/A 0.390±0.00 N/A N/A 0.598±0.00 14.553±8.65 37.773±0.00 N/A 5.593±2.33 N/A N/A N/A
ENST00000531239 36.019±0.00 N/A 1.393±0.00 9.201±0.00 31.201±0.00 27.228±0.00 N/A N/A N/A N/A 5.905±0.00 52.965±0.00 26.027±0.00 19.673±4.56
ENST00000533429 N/A 24.604±0.00 N/A N/A N/A 2.098±0.00 N/A 1.161±0.00 N/A N/A N/A 16.979±0.00 N/A 5.525±0.00
ENST00000542982 N/A N/A N/A 0.632±0.00 3.310±0.00 N/A N/A N/A N/A 1.226±0.00 N/A 1.292±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000722 TAS telomere maintenance via recombination
GO:0000723 TAS telomere maintenance
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005515 IPI protein binding
GO:0005634 TAS:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006260 TAS:IEA DNA replication
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0006281 TAS DNA repair
GO:0006283 TAS transcription-coupled nucleotide-excision repair
GO:0006284 TAS base-excision repair
GO:0006289 TAS nucleotide-excision repair
GO:0006297 TAS nucleotide-excision repair, DNA gap filling
GO:0032201 TAS telomere maintenance via semi-conservative replication
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079632 POLD4 polymerase (DNA-directed), delta 4, accessory subunit protein_coding Danio_rerio
ENSMUSG00000024854 Pold4 polymerase (DNA-directed), delta 4 protein_coding Mus_musculus

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