C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RuvB-like AAA ATPase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175792 RUVBL1 9606 - 3:128064778-128153914 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322623 RUVBL1-001 128080960-128123824 protein_coding
  ENST00000464873 RUVBL1-002 128064785-128153914 protein_coding
  ENST00000472125 RUVBL1-003 128064782-128101619 protein_coding
  ENST00000478243 RUVBL1-005 128084843-128087811 processed_transcript
  ENST00000478892 RUVBL1-004 128081182-128100744 protein_coding
  ENST00000480616 RUVBL1-006 128083602-128087795 processed_transcript
  ENST00000582176 RUVBL1-009 128080961-128085022 retained_intron
  ENST00000585057 RUVBL1-008 128064778-128097496 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000322623
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000322623 1.501±0.00 7.140±3.54 5.467±0.00 20.831±0.00 2.851±0.00 4.254±0.00 4.268±0.00 1.122±0.00 22.171±8.77 33.582±8.99 30.631±5.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000812 IDA Swr1 complex
GO:0003678 IDA:IEA DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006325 TAS chromatin organization
GO:0006334 TAS nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007067 IEA mitotic nuclear division
GO:0007283 TAS spermatogenesis
GO:0009378 IEA four-way junction helicase activity
GO:0016020 IEA membrane
GO:0031011 IDA Ino80 complex
GO:0032508 IEA DNA duplex unwinding
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0035267 IDA NuA4 histone acetyltransferase complex
GO:0040008 IEA regulation of growth
GO:0043141 IEA ATP-dependent 5'-3' DNA helicase activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043234 IEA protein complex
GO:0043967 IDA histone H4 acetylation
GO:0043968 IDA histone H2A acetylation
GO:0070062 IDA extracellular vesicular exosome
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002591 ruvbl1 RuvB-like 1 (E. coli) protein_coding Danio_rerio
ENSMUSG00000030079 Ruvbl1 RuvB-like protein 1 protein_coding Mus_musculus
ENSMUSG00000079076 Gm3086 predicted gene 3086 protein_coding Mus_musculus

Loading