C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2O
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175931 UBE2O 9606 - 17:76389451-76453206 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319380 UBE2O-001 76389451-76453206 protein_coding
  ENST00000586409 UBE2O-002 76395358-76453141 retained_intron
  ENST00000586505 UBE2O-004 76401731-76405232 retained_intron
  ENST00000587127 UBE2O-003 76389797-76399617 protein_coding
  ENST00000587581 UBE2O-006 76397808-76399374 processed_transcript
  ENST00000590658 UBE2O-005 76399789-76402641 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319380ENST00000586409ENST00000587127ENST00000590658
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319380 3.731±0.00 2.781±0.00 0.146±0.00 6.064±4.01 1.210±0.78 3.134±0.00 3.563±0.00 3.116±0.00 0.614±0.00 1.450±0.00 3.565±2.97 3.859±2.97 1.869±0.92 9.466±1.18
ENST00000586409 N/A N/A N/A 0.914±0.00 0.318±0.00 0.965±0.00 0.560±0.00 N/A N/A N/A N/A 0.892±0.00 N/A N/A
ENST00000587127 1.124±0.00 N/A 0.428±0.00 N/A 2.241±0.00 1.449±0.00 1.252±0.00 N/A 0.711±0.35 1.040±0.62 0.426±0.00 2.732±1.57 1.534±0.52 5.619±0.00
ENST00000590658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.938±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00079O CIL_00079O_0001 CGP 17:76376584-76453206
CIL_0001VD CIL_0001VD_0001 CGP 17:76389451-76470117

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006513 IDA protein monoubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0030513 IDA positive regulation of BMP signaling pathway
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0044822 IDA poly(A) RNA binding
GO:0070534 IMP protein K63-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075552 UBE2O ubiquitin-conjugating enzyme E2O protein_coding Danio_rerio
ENSMUSG00000020802 Ube2o ubiquitin-conjugating enzyme E2O protein_coding Mus_musculus

Loading