C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forkhead box G1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176165 FOXG1 9606 + 14:28766974-28770273 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313071 FOXG1-001 28766974-28770273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungOvaryPlacentaTestisENST00000313071
Transcript ID Adipose Adrenal Brain Breast Colon Lung Ovary Placenta Testis
ENST00000313071 0.026±0.00 0.125±0.00 6.404±3.41 0.004±0.00 0.048±0.00 0.064±0.00 0.068±0.02 0.030±0.00 5.329±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095I CIL_00095I_0001 VISTA 14:28456869-29058467
CIL_0008Y3 CIL_0008Y3_0001 VISTA 14:28595815-29196929
CIL_0007MH CIL_0007MH_0001 UCNEbase 14:28763941-29529087

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007420 TAS brain development
GO:0007568 IEA aging
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070769 foxg1a forkhead box G1a protein_coding Danio_rerio
ENSMUSG00000020950 Foxg1 forkhead box G1 protein_coding Mus_musculus
ENSMUSG00000089922 3110039M20Rik RIKEN cDNA 3110039M20 gene protein_coding Mus_musculus

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