C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tachykinin 4 (hemokinin)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176358 TAC4 9606 - 17:49838309-49848017 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326219 TAC4-006 49838309-49848017 protein_coding
  ENST00000334568 TAC4-003 49838309-49848017 protein_coding
  ENST00000352793 TAC4-001 49838309-49848017 protein_coding
  ENST00000398154 TAC4-004 49838309-49848017 protein_coding
  ENST00000436235 TAC4-005 49838309-49848017 protein_coding
  ENST00000503603 TAC4-002 49844060-49848017 nonsense_mediated_decay
  ENST00000608380 TAC4-008 49844057-49848017 retained_intron
  ENST00000608861 TAC4-007 49844056-49848017 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartOvaryENST00000326219ENST00000352793
Transcript ID Adipose Brain Heart Ovary
ENST00000326219 0.140±0.00 N/A 0.175±0.00 N/A
ENST00000352793 N/A 0.199±0.00 N/A 0.920±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000877 CIL_000877_0001 VISTA 17:49438854-50041456
CIL_0009BV CIL_0009BV_0001 VISTA 17:49438877-50041441
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005576 IEA extracellular region
GO:0007217 IEA tachykinin receptor signaling pathway
GO:0008217 IEA regulation of blood pressure
GO:0046878 IEA positive regulation of saliva secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000020872 Tac4 tachykinin 4 protein_coding Mus_musculus

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