C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 3A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176463 SLCO3A1 9606 + 15:91853695-92172435 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318445 SLCO3A1-001 91853695-92165903 protein_coding
  ENST00000424469 SLCO3A1-002 91853856-92172435 protein_coding
  ENST00000553304 SLCO3A1-007 91854121-91916378 protein_coding
  ENST00000553653 SLCO3A1-003 91853723-92151216 retained_intron
  ENST00000555111 SLCO3A1-008 91854025-91908759 processed_transcript
  ENST00000555210 SLCO3A1-013 92126186-92162946 nonsense_mediated_decay
  ENST00000555513 SLCO3A1-011 92153563-92163208 processed_transcript
  ENST00000555549 SLCO3A1-005 92097930-92163546 processed_transcript
  ENST00000555769 SLCO3A1-006 91854336-92155269 processed_transcript
  ENST00000555892 SLCO3A1-012 92126184-92171847 nonsense_mediated_decay
  ENST00000556649 SLCO3A1-009 91941318-92104537 processed_transcript
  ENST00000564072 SLCO3A1-014 92161575-92163546 retained_intron
  ENST00000566477 SLCO3A1-015 92170872-92172435 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318445ENST00000424469ENST00000553653ENST00000555549ENST00000564072
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318445 6.035±0.00 6.028±0.00 N/A 5.610±0.00 1.883±1.21 1.140±0.87 7.255±0.00 4.763±0.00 0.438±0.00 5.987±0.00 0.652±0.59 2.331±1.74 0.566±0.20 5.645±0.00
ENST00000424469 N/A 4.430±0.00 N/A N/A N/A N/A 7.576±0.00 N/A N/A N/A 1.565±0.00 N/A 0.422±0.00 N/A
ENST00000553653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.690±0.00 5.227±0.00 N/A N/A
ENST00000555549 5.981±0.00 5.104±0.00 0.883±0.00 0.910±0.00 3.431±0.00 N/A N/A 0.721±0.00 0.580±0.08 9.080±0.00 N/A N/A 0.984±0.20 19.677±7.01
ENST00000564072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.200±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043252 TAS sodium-independent organic anion transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018726 slco3a1 solute carrier organic anion transporter family, member 3A1 protein_coding Danio_rerio
ENSDARG00000068296 SLCO3A1 (2 of 2) solute carrier organic anion transporter family, member 3A1 protein_coding Danio_rerio
ENSMUSG00000025790 Slco3a1 solute carrier organic anion transporter family, member 3a1 protein_coding Mus_musculus

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