C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 72, E3 ubiquitin protein ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177238 TRIM72 9606 + 16:31214021-31226427 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322122 TRIM72-001 31214021-31225189 protein_coding
  ENST00000613872 TRIM72-201 31214091-31226427 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322122ENST00000613872
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322122 0.175±0.00 0.271±0.00 N/A 0.137±0.09 1.169±1.03 0.211±0.00 0.331±0.31 N/A 0.134±0.09 0.055±0.00 33.478±25.01 1.141±1.30 N/A 0.725±0.65
ENST00000613872 0.102±0.00 N/A 0.156±0.00 N/A 0.717±0.20 N/A 0.249±0.00 0.116±0.00 0.042±0.00 0.096±0.00 17.745±9.45 2.086±0.41 0.038±0.00 0.328±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035T CIL_00035T_0001 CGP 16:31201485-31226427

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001778 ISS plasma membrane repair
GO:0001786 ISS phosphatidylserine binding
GO:0003012 ISS muscle system process
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0006887 IEA exocytosis
GO:0007517 ISS muscle organ development
GO:0008270 IEA zinc ion binding
GO:0030659 ISS cytoplasmic vesicle membrane
GO:0042383 ISS sarcolemma
GO:0046872 IEA metal ion binding
GO:0051260 ISS protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000042828 Trim72 tripartite motif-containing 72 protein_coding Mus_musculus

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