C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: uromodulin-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177398 UMODL1 9606 + 21:42062959-42143453 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000400421 UMODL1-008 42085303-42104057 nonsense_mediated_decay
  ENST00000400423 UMODL1-012 42120519-42142995 processed_transcript
  ENST00000400424 UMODL1-004 42062959-42143453 protein_coding
  ENST00000400427 UMODL1-003 42062959-42142995 protein_coding
  ENST00000408910 UMODL1-002 42071317-42142995 protein_coding
  ENST00000408989 UMODL1-001 42071317-42142995 protein_coding
  ENST00000466434 UMODL1-009 42085303-42104057 nonsense_mediated_decay
  ENST00000468982 UMODL1-006 42085303-42104057 nonsense_mediated_decay
  ENST00000475047 UMODL1-011 42111397-42115934 processed_transcript
  ENST00000484174 UMODL1-014 42120519-42126396 processed_transcript
  ENST00000484712 UMODL1-013 42127678-42137631 processed_transcript
  ENST00000485357 UMODL1-010 42085303-42104057 nonsense_mediated_decay
  ENST00000491559 UMODL1-005 42085303-42104057 nonsense_mediated_decay
  ENST00000497243 UMODL1-007 42085303-42104057 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungOvaryTestisENST00000400421ENST00000400423ENST00000400427ENST00000408910ENST00000408989ENST00000475047ENST00000484174ENST00000484712ENST00000497243
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000400421 N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A
ENST00000400423 N/A 0.105±0.00 0.007±0.00 0.294±0.00 N/A 0.010±0.00 0.172±0.00 0.250±0.00 N/A
ENST00000400427 N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A
ENST00000408910 0.056±0.00 0.114±0.00 N/A N/A N/A N/A N/A N/A 2.285±0.00
ENST00000408989 N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 0.404±0.00
ENST00000475047 N/A N/A N/A N/A 0.024±0.00 N/A N/A 0.150±0.00 N/A
ENST00000484174 N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A
ENST00000484712 N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A
ENST00000497243 N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036J CIL_00036J_0001 CGP 21:42062959-42297244

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0007338 IEA single fertilization
GO:0009897 IEA external side of plasma membrane
GO:0010466 IEA negative regulation of peptidase activity
GO:0010468 IEA regulation of gene expression
GO:0016021 IEA integral component of membrane
GO:0030414 IEA peptidase inhibitor activity
GO:0042981 IEA regulation of apoptotic process
GO:0048609 IEA multicellular organismal reproductive process
GO:0060612 IEA adipose tissue development
GO:0097211 IEA cellular response to gonadotropin-releasing hormone
GO:2000354 IEA regulation of ovarian follicle development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068923 umodl1 uromodulin-like 1 protein_coding Danio_rerio
ENSMUSG00000054134 Umodl1 uromodulin-like 1 protein_coding Mus_musculus

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