C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD163 molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177575 CD163 9606 - 12:7470813-7503893 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359156 CD163-001 7470813-7503893 protein_coding
  ENST00000396620 CD163-003 7471180-7503776 protein_coding
  ENST00000432237 CD163-002 7471180-7503776 protein_coding
  ENST00000534848 CD163-011 7471171-7471936 processed_transcript
  ENST00000537044 CD163-004 7470816-7503776 retained_intron
  ENST00000537626 CD163-007 7471180-7483492 protein_coding
  ENST00000538840 CD163-006 7483294-7485418 retained_intron
  ENST00000539632 CD163-008 7483400-7485344 processed_transcript
  ENST00000541972 CD163-005 7471180-7502737 protein_coding
  ENST00000542280 CD163-009 7471176-7483574 protein_coding
  ENST00000542705 CD163-010 7470974-7473179 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359156ENST00000432237ENST00000537044ENST00000537626ENST00000539632ENST00000541972
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359156 N/A N/A N/A N/A 3.847±0.00 N/A N/A 7.358±3.64 N/A N/A N/A 2.071±0.00 8.763±0.00 N/A
ENST00000432237 56.612±0.00 10.914±0.00 N/A 13.724±0.00 8.164±1.26 3.235±0.00 1.006±0.00 18.911±0.00 N/A N/A N/A 5.816±4.52 23.304±13.75 5.299±0.00
ENST00000537044 N/A 3.630±0.00 N/A N/A N/A N/A 4.469±0.00 N/A 1.575±0.00 1.725±0.00 N/A 2.041±0.00 N/A N/A
ENST00000537626 N/A 37.156±0.00 N/A N/A N/A 12.125±0.00 N/A N/A N/A 18.561±0.00 N/A N/A N/A 14.895±0.00
ENST00000539632 N/A N/A 2.794±0.00 N/A N/A N/A N/A N/A N/A N/A 1.450±0.00 N/A N/A N/A
ENST00000541972 44.864±0.00 13.376±0.00 0.909±0.00 5.096±0.00 8.165±0.00 3.252±0.00 25.764±0.00 24.823±11.95 39.818±0.00 9.568±2.43 2.933±0.00 4.280±2.06 36.996±2.69 6.407±0.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005044 NAS:IEA scavenger receptor activity
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006898 IEA receptor-mediated endocytosis
GO:0006953 IEA acute-phase response
GO:0016020 IEA membrane
GO:0030666 TAS endocytic vesicle membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078502 CD163 molecule protein_coding Danio_rerio
ENSMUSG00000008845 Cd163 CD163 antigen protein_coding Mus_musculus

Loading