C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GRAM domain containing 1C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178075 GRAMD1C 9606 + 3:113828182-113947174 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358160 GRAMD1C-001 113838418-113947174 protein_coding
  ENST00000440446 GRAMD1C-006 113897470-113947160 protein_coding
  ENST00000462838 GRAMD1C-007 113890665-113939950 protein_coding
  ENST00000463760 GRAMD1C-015 113838900-113901135 processed_transcript
  ENST00000466898 GRAMD1C-008 113938326-113947174 retained_intron
  ENST00000467895 GRAMD1C-002 113844503-113844965 processed_transcript
  ENST00000471031 GRAMD1C-012 113934487-113936923 retained_intron
  ENST00000472026 GRAMD1C-005 113890625-113945770 protein_coding
  ENST00000472384 GRAMD1C-003 113838881-113934456 nonsense_mediated_decay
  ENST00000479212 GRAMD1C-004 113828182-113945560 processed_transcript
  ENST00000484714 GRAMD1C-016 113838905-113915838 nonsense_mediated_decay
  ENST00000486457 GRAMD1C-010 113838874-113901045 processed_transcript
  ENST00000488680 GRAMD1C-011 113897492-113915782 protein_coding
  ENST00000491038 GRAMD1C-013 113939726-113945760 retained_intron
  ENST00000498183 GRAMD1C-009 113838818-113875867 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358160ENST00000440446ENST00000462838ENST00000466898ENST00000472026ENST00000472384ENST00000479212ENST00000491038
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358160 0.108±0.00 0.483±0.00 N/A 0.528±0.00 0.237±0.00 0.069±0.00 0.039±0.00 N/A N/A N/A 0.003±0.00 0.416±0.23 N/A 1.597±0.67
ENST00000440446 N/A N/A 4.305±0.00 0.577±0.00 N/A 0.749±0.32 0.457±0.00 3.138±0.12 N/A 0.575±0.11 N/A 0.431±0.16 1.685±0.73 N/A
ENST00000462838 0.223±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466898 N/A 0.183±0.00 N/A N/A 0.195±0.00 0.490±0.00 N/A 1.189±0.00 N/A N/A N/A 0.237±0.03 N/A N/A
ENST00000472026 N/A N/A 5.041±0.00 N/A N/A N/A N/A 3.250±0.00 0.415±0.00 1.551±0.00 N/A N/A N/A N/A
ENST00000472384 N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000479212 N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A 0.625±0.00 N/A N/A
ENST00000491038 N/A N/A N/A N/A 2.066±0.00 N/A N/A N/A 1.781±0.00 N/A 0.087±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076238 GRAMD1C GRAM domain containing 1C protein_coding Danio_rerio
ENSMUSG00000036292 Gramd1c GRAM domain containing 1C protein_coding Mus_musculus

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