C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal transducing adaptor family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178078 STAP2 9606 - 19:4324043-4342786 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000594605 STAP2-003 4324043-4338877 protein_coding
  ENST00000596242 STAP2-008 4324817-4327370 retained_intron
  ENST00000597593 STAP2-005 4324610-4328226 processed_transcript
  ENST00000598443 STAP2-009 4324043-4328773 protein_coding
  ENST00000599736 STAP2-001 4324044-4342786 nonsense_mediated_decay
  ENST00000600324 STAP2-002 4324043-4338821 protein_coding
  ENST00000601179 STAP2-004 4325418-4328993 retained_intron
  ENST00000601482 STAP2-006 4325459-4338809 protein_coding
  ENST00000601956 STAP2-010 4324043-4326952 protein_coding
  ENST00000602007 STAP2-007 4324879-4327384 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000594605ENST00000596242ENST00000597593ENST00000598443ENST00000599736ENST00000600324ENST00000601179ENST00000601482ENST00000601956ENST00000602007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000594605 1.688±0.00 2.235±0.00 1.319±0.00 N/A 2.576±0.00 6.868±0.00 0.334±0.00 6.075±1.31 2.752±2.62 3.757±0.00 N/A 5.998±4.01 3.166±1.58 1.501±0.00
ENST00000596242 N/A N/A N/A N/A N/A N/A 0.746±0.00 N/A N/A N/A 0.217±0.01 N/A N/A N/A
ENST00000597593 N/A N/A N/A N/A N/A N/A N/A N/A 0.703±0.00 N/A N/A 31.511±0.00 N/A N/A
ENST00000598443 2.897±0.00 2.601±0.00 N/A 0.123±0.00 N/A 5.529±0.00 N/A N/A 4.961±0.00 N/A N/A N/A N/A N/A
ENST00000599736 N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.211±0.00
ENST00000600324 0.585±0.00 1.059±0.00 N/A 0.226±0.04 0.868±0.11 4.442±0.00 0.251±0.00 N/A N/A N/A 0.338±0.00 7.491±0.02 2.523±0.73 0.182±0.00
ENST00000601179 N/A N/A N/A N/A 2.479±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601482 0.998±0.00 N/A N/A N/A 1.031±0.00 N/A N/A 4.240±2.15 0.404±0.00 1.206±0.74 0.191±0.00 8.617±3.22 N/A N/A
ENST00000601956 N/A 4.468±0.00 N/A N/A 3.321±0.00 5.609±0.00 N/A 10.067±0.00 N/A N/A N/A 39.373±0.00 2.505±0.00 1.857±0.73
ENST00000602007 0.944±0.00 N/A N/A 1.209±0.00 N/A N/A 0.173±0.00 N/A N/A 0.280±0.00 N/A N/A 2.893±0.00 1.198±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QV CIL_0005QV_0002 CGP 19:4304600-4342786
CIL_0005QU CIL_0005QU_0002 CGP 19:4324043-4360086

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043281 stap2b signal transducing adaptor family member 2b protein_coding Danio_rerio
ENSDARG00000092810 stap2a signal transducing adaptor family member 2a protein_coding Danio_rerio
ENSMUSG00000038781 Stap2 signal transducing adaptor family member 2 protein_coding Mus_musculus

Loading