C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NOP2/Sun domain family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178694 NSUN3 9606 + 3:94062916-94128545 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314622 NSUN3-001 94062916-94128545 protein_coding
  ENST00000461625 NSUN3-004 94063011-94064518 processed_transcript
  ENST00000468555 NSUN3-005 94063061-94084176 processed_transcript
  ENST00000476588 NSUN3-002 94062990-94085382 retained_intron
  ENST00000477077 NSUN3-003 94062980-94064403 processed_transcript
  ENST00000483378 NSUN3-007 94062980-94095094 nonsense_mediated_decay
  ENST00000485793 NSUN3-006 94062998-94082173 processed_transcript
  ENST00000494128 NSUN3-008 94076342-94081821 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314622ENST00000476588ENST00000483378
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314622 0.480±0.00 N/A 0.892±0.00 N/A 0.385±0.00 0.697±0.23 0.519±0.00 0.579±0.00 0.308±0.00 0.370±0.07 1.380±0.00 0.843±0.34 0.978±0.00
ENST00000476588 N/A 0.914±0.00 N/A 2.751±0.00 N/A N/A N/A N/A N/A N/A 1.203±0.00 N/A N/A
ENST00000483378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.695±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VB CIL_0007VB_0001 VISTA 3:94032174-94634985

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013023 nsun3 NOP2/Sun domain family, member 3 protein_coding Danio_rerio
ENSMUSG00000050312 Nsun3 NOL1/NOP2/Sun domain family member 3 protein_coding Mus_musculus

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