C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycerophosphodiester phosphodiesterase domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178795 GDPD4 9606 - 11:77216558-77301687 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315938 GDPD4-001 77216558-77287418 protein_coding
  ENST00000376217 GDPD4-002 77216558-77287418 protein_coding
  ENST00000527489 GDPD4-005 77271356-77301649 processed_transcript
  ENST00000532155 GDPD4-003 77270920-77301687 retained_intron
  ENST00000532907 GDPD4-006 77216862-77224302 processed_transcript
  ENST00000534245 GDPD4-004 77286923-77301666 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000376217ENST00000532907
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000376217 N/A 0.018±0.00 0.022±0.00 0.006±0.00 0.005±0.00 0.013±0.00 N/A N/A N/A N/A 0.090±0.05 0.045±0.03 N/A
ENST00000532907 0.145±0.00 0.075±0.00 N/A 0.222±0.00 0.095±0.00 N/A 0.056±0.00 0.247±0.00 0.211±0.00 0.171±0.00 0.179±0.00 0.432±0.14 2.751±2.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JF CIL_0001JF_0002 CGP 11:77128264-77301687

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074361 GDPD4 (1 of 3) glycerophosphodiester phosphodiesterase domain containing 4 protein_coding Danio_rerio
ENSDARG00000078196 gdpd4a glycerophosphodiester phosphodiesterase domain containing 4a protein_coding Danio_rerio
ENSDARG00000079293 GDPD4 (3 of 3) glycerophosphodiester phosphodiesterase domain containing 4 protein_coding Danio_rerio
ENSMUSG00000035582 Gdpd4 glycerophosphodiester phosphodiesterase domain containing 4 protein_coding Mus_musculus

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