C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 14 open reading frame 39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179008 C14orf39 9606 - 14:60396469-60515543 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321731 C14orf39-001 60435956-60486096 protein_coding
  ENST00000498565 C14orf39-002 60396469-60455050 nonsense_mediated_decay
  ENST00000555476 C14orf39-004 60471632-60486044 protein_coding
  ENST00000556799 C14orf39-005 60478357-60515543 protein_coding
  ENST00000557138 C14orf39-003 60436623-60486019 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonMuscleOvaryPlacentaTestisENST00000321731ENST00000555476ENST00000556799ENST00000557138
Transcript ID Adipose Adrenal Brain Breast Colon Muscle Ovary Placenta Testis
ENST00000321731 N/A 0.023±0.00 N/A 0.041±0.02 0.012±0.00 N/A 0.051±0.04 N/A 2.551±0.32
ENST00000555476 0.078±0.00 N/A N/A N/A N/A 0.197±0.00 0.019±0.00 N/A 7.635±0.00
ENST00000556799 N/A N/A N/A N/A 0.193±0.00 N/A N/A 0.072±0.00 N/A
ENST00000557138 0.048±0.00 N/A 0.006±0.00 N/A 0.090±0.00 0.238±0.09 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S6 CIL_0000S6_0001 CGP 14:60245752-60515543
CIL_0008MW CIL_0008MW_0001 VISTA 14:60353481-60955733
CIL_0000RZ CIL_0000RZ_0001 CGP 14:60396469-60515543

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007275 IEA multicellular organismal development
GO:0051090 NAS regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000021098 4930447C04Rik RIKEN cDNA 4930447C04 gene protein_coding Mus_musculus

Loading