C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T cell activation inhibitor, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179152 TCAIM 9606 + 3:44338119-44409451 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342649 TCAIM-001 44338452-44409451 protein_coding
  ENST00000383746 TCAIM-002 44338119-44359804 protein_coding
  ENST00000396078 TCAIM-003 44338452-44359802 protein_coding
  ENST00000412611 TCAIM-007 44338757-44409451 nonsense_mediated_decay
  ENST00000417237 TCAIM-005 44338119-44407790 protein_coding
  ENST00000417768 TCAIM-014 44338806-44400550 nonsense_mediated_decay
  ENST00000431657 TCAIM-008 44338776-44408874 nonsense_mediated_decay
  ENST00000444602 TCAIM-011 44338760-44362683 processed_transcript
  ENST00000462230 TCAIM-013 44338752-44367879 retained_intron
  ENST00000462612 TCAIM-004 44338783-44341425 processed_transcript
  ENST00000469246 TCAIM-015 44396787-44407740 processed_transcript
  ENST00000494638 TCAIM-012 44338122-44367624 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342649ENST00000383746ENST00000396078ENST00000412611ENST00000417237ENST00000431657ENST00000462612
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342649 N/A 0.371±0.00 N/A 0.723±0.00 1.406±0.00 1.131±0.00 2.595±0.00 1.499±0.00 1.387±0.00 N/A 0.619±0.00 0.714±0.20 0.767±0.06 0.630±0.00
ENST00000383746 1.108±0.00 1.108±0.00 N/A N/A 1.659±0.00 N/A N/A 2.547±0.43 4.400±0.00 1.112±0.00 0.817±0.00 1.814±0.03 1.500±0.29 1.220±0.14
ENST00000396078 1.095±0.00 1.028±0.00 1.675±0.00 1.760±0.00 1.760±0.00 0.995±0.00 N/A 1.662±0.12 N/A 0.739±0.00 1.646±0.00 1.700±0.99 N/A N/A
ENST00000412611 1.897±0.00 1.147±0.00 N/A 2.139±0.66 2.710±0.00 2.052±1.08 N/A 2.974±2.03 2.483±0.00 1.558±0.00 2.290±0.00 1.708±0.70 1.022±0.33 2.209±0.85
ENST00000417237 N/A N/A N/A 2.209±0.00 N/A N/A 1.372±0.00 N/A N/A N/A 1.211±0.00 N/A N/A N/A
ENST00000431657 N/A N/A N/A N/A N/A 0.717±0.00 N/A N/A N/A 0.782±0.00 N/A N/A N/A 1.386±0.00
ENST00000462612 N/A N/A 1.394±0.00 N/A 1.286±0.00 N/A N/A N/A N/A 2.271±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JG CIL_0005JG_0001 CGP 3:44241886-44409451
CIL_0005JI CIL_0005JI_0001 CGP 3:44338119-44477670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079881 TCAIM T cell activation inhibitor, mitochondrial protein_coding Danio_rerio
ENSMUSG00000046603 Tcaim T cell activation inhibitor, mitochondrial protein_coding Mus_musculus

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